Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915024.1_cds_XP_016464948.1_57941
CDS Infomation

[gene=LOC107787850] [db_xref=GeneID:107787850] [protein=PAX3- and PAX7-binding protein 1-like isoform X2] [protein_id=XP_016464948.1] [location=join(232..863,1176..1458,1550..1827,3457..3487)] [gbkey=CDS]
Sequence

ATGCAGAAGCTTCACAAAGAACGAGCAGCAGCCATCTTAGAAAGGAGAGCTGCCGATAGT
GATGATGACATGAAGGAACTAGTAGCTGCTATAAGTGCTGCAAATCAAGTTCTAAGTAAA
GGAGGTGGTGATGCAGAAACAATAAAAGCTGTGGCAGCTGCTGCTCTGGCTCTAAGAGCA
GCTGTGAGGGAAGGAGGGGATTTTCCAGTCGAGCTAGATGAATTCAGTAGAGATGGGAAT
ATGCAGAATCAGATGGATGTGAGCAGAAGGGCAAACGCCCGAGAACGCAGGAGAGCAAGA
AATGATGTTATGAGAATGCCAGCTATAGGATCCTATCCGCCAATAGAAGGAGAATTAGAC
ACTGATGAAAGTGACACCGAGAGCAATGCGTATCGGTCTCAGCATGATCAATTGCTTCAC
TCTACTAAACAGATTTTTGGTGATAAACATGAATACTCTGAATTTTCCGTAGTTGTGAGA
AAGTTTTATAGATGGAAGAAAGATTATACTTCAAGCTATCGTGATGCACATGTGTCCGTT
TGTATACCTGCTATTTTCTCACCCTATGTGAGGCTGGAGCTTCTGAAGTGGGATCCTCTA
CATGAAAATGCAAATTTCATGAATGTGAAATGGTATACTTTGCTTCGTAAGTATGGACTC
TCTACAGATGAAAATCCAAATAGCTTTGATGACGCTGATGCCAATCCTGTTCAATTGGTG
GTGAAACTTGCAATGGCCATTCTACATAACCGGTTAGCTCAGTGCTGGGATGTGTTTAGC
ACCCGTGAGACACAGTGTGCTGTATCTGCCATAAATCTGTTGTTAAGAAGACGTCTTCCG
TCCACTGACCCTTCATACACTGATCTAGTTAACACGGTTCATGAGCGTCTAGATAAGGCT
GTTGCTAATTTGACGGTCCTTGTGTTGGACTCACTTGTAACGGAAGCTGTACCTGATGCA
GCACGAGTCGCTGCATATAGGTTTGGAATGTCTCTTCGCTTGATGTCTAATATATGCTTG
TTCCATAACGGTGGGATTCTTGCCATGGCTGTCATAGAAGAACTTGCTCTTGATAAACTC
TTATGTGGGAAGATTCTTCCTTATCTTCGAGGCATCCAAGCAAACATTCACGATGCTATT
ATGAGAACTGAGAAAGTTGTTTCATTAACTGGTATTTTCGCAGGGGATCACAGGAACTCT
TTAGTTTGTGACAACTGGTGGTGA

Peptide Sequence

PEP ID

XP_016464948.1
PEP Infomation

PREDICTED: PAX3- and PAX7-binding protein 1-like isoform X2 [Nicotiana tabacum]
Sequence

MQKLHKERAAAILERRAADSDDDMKELVAAISAANQVLSKGGGDAETIKAVAAAALALRA
AVREGGDFPVELDEFSRDGNMQNQMDVSRRANARERRRARNDVMRMPAIGSYPPIEGELD
TDESDTESNAYRSQHDQLLHSTKQIFGDKHEYSEFSVVVRKFYRWKKDYTSSYRDAHVSV
CIPAIFSPYVRLELLKWDPLHENANFMNVKWYTLLRKYGLSTDENPNSFDDADANPVQLV
VKLAMAILHNRLAQCWDVFSTRETQCAVSAINLLLRRRLPSTDPSYTDLVNTVHERLDKA
VANLTVLVLDSLVTEAVPDAARVAAYRFGMSLRLMSNICLFHNGGILAMAVIEELALDKL
LCGKILPYLRGIQANIHDAIMRTEKVVSLTGIFAGDHRNSLVCDNWW

Transcript Sequence

Gene sequence data has not been registered.